All pull requests

Pull requests

• Feature: add the command runners and the command line

  #96·nakib103 opened Nov 2, 2026Collaborator·15/15·

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• Feature: add the benchmark harness

  #95·nakib103 opened Nov 2, 2026Collaborator·14/15·

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• Feature: explain an annotation against its input

  #94·nakib103 opened Nov 2, 2026Collaborator·13/15·

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• Feature: run annotation as a workflow of tracks

  #93·nakib103 opened Nov 2, 2026Collaborator·12/15·

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• Feature: write and read annotation output

  #92·nakib103 opened Nov 2, 2026Collaborator·11/15·

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• Feature: collect and report run statistics

  #91·nakib103 opened Nov 2, 2026Collaborator·10/15·

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• Feature: add sequence-region input buffers

  #90·nakib103 opened Nov 2, 2026Collaborator·9/15·

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• Feature: match features and find their overlaps

  #89·nakib103 opened Nov 2, 2026Collaborator·8/15·

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• Feature: build input, transcript and sequence sources

  #88·nakib103 opened Nov 2, 2026Collaborator·7/15·

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• Feature: resolve corpora, exporters and formats from registries

  #87·nakib103 opened Nov 2, 2026Collaborator·6/15·

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• Feature: add binned feature and interval caches

  #86·nakib103 opened Nov 2, 2026Collaborator·5/15·

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• Bugfix: fix most severe consequence and use of subseq

  #85·nakib103 opened Nov 2, 2026Collaborator·4/15·

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• Feature: give feature sources a record interface

  #84·nakib103 opened Nov 2, 2026Collaborator·3/15·

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• Feature: add shared region, coordinate and logging helpers

  #83·nakib103 opened Nov 2, 2026Collaborator·2/15·

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• Feature: read records as lines in the Rust parsers

  #82·nakib103 opened Nov 2, 2026Collaborator·1/15·

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• Feature: add consequence annotation caches

  #79·nakib103 opened Oct 21, 2026Collaborator·6/8·

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• Feature: integrate annotators with corpora

  #77·nakib103 opened Oct 20, 2026Collaborator·8/8·

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• Feature: add consequence annotation strategies

  #76·nakib103 opened Oct 20, 2026Collaborator·7/8·

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• Change docs system to Sphinx

  #34·richysix opened Aug 25, 2026Collaborator·

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• Chore: developer doc update

  #23·nakib103 opened Jun 16, 2026Collaborator·

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• chore: match import in __ini__.py

  #21·nakib103 opened Jun 16, 2026Collaborator·

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