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18 followers · 6 following

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Achievement: Pull Sharkx3Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx3Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

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nschan/README.md

👀 I’m interested in 🌱 and 🦠🦠

I want to understand how plant and microbial genetics determine the outcome of plant microbiome recruitment and consequent plant phenotypic responses.

I am a research group leader at LMU Munich, you can find more information about my work and my publications by clicking on these links.

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  1. nf-core/genomeassembler nf-core/genomeassembler Public

    Assembly and scaffolding of haploid / unphased genomes from long ONT or PacBio HiFi reads

    Nextflow 33 22

  2. nf-plotsv nf-plotsv Public

    Compare genomes using minimap2, SyRi and plotsr in a nextflow pipeline

    Nextflow 8 2

  3. nf-annotate nf-annotate Public

    (Plant) genome annotation pipeline

    Nextflow 6 1

  4. syri_gggenomes syri_gggenomes Public

    Plot SyRi output via gggenomes

    R 8

  5. Gregor-Mendel-Institute/gwaR Gregor-Mendel-Institute/gwaR Public

    A collection of R functions to conduct downstream GWAS analysis for arabidopsis thaliana.

    R 5 1