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Fix 'multiqc_title' param modifying the output multiqc directory structure #265

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Merged
FranBonath merged 2 commits into from
Aug 12, 2026
Merged

Fix 'multiqc_title' param modifying the output multiqc directory structure #265

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36eb076
Fix 'multiqc_title' param modifying the output directory structure, b…
pontushojer Jul 29, 2026
4e4231f
update parameter desc
pontushojer Jul 29, 2026
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2 changes: 2 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -11,6 +11,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Fixed`

- [#264](https://github.com/nf-core/seqinspector/pull/264) Fix `--multiqc_title` modifying the output directory structure, breaking the report index section ([#261](https://github.com/nf-core/seqinspector/issues/261))

### `Changed`

- [#259](https://github.com/nf-core/seqinspector/pull/259) Back to dev
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6 changes: 6 additions & 0 deletions assets/multiqc_config.yml
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Expand Up @@ -14,6 +14,12 @@ report_section_order:

export_plots: true

# Set static output file names for the report, data and plots directories so these
# are not changed when "--multiqc_title" is specified, required for index section to work properly
output_fn_name: "multiqc_report.html"
data_dir_name: "multiqc_data"
plots_dir_name: "multiqc_plots"
Comment on lines +17 to +21

disable_version_detection: true

fn_clean_trim:
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2 changes: 1 addition & 1 deletion nextflow_schema.json
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Expand Up @@ -46,7 +46,7 @@
},
"multiqc_title": {
"type": "string",
"description": "MultiQC report title. Printed as page header, used for filename if not otherwise specified.",
"description": "MultiQC report title. Printed as page header.",
"fa_icon": "fas fa-file-signature"
},
"tools": {
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