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feat: add gks support for oncogenic assertions#240

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korikuzma wants to merge 21 commits into
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issue-217-add-onco
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feat: add gks support for oncogenic assertions#240
korikuzma wants to merge 21 commits into
masterfrom
issue-217-add-onco

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close #217

part of #217

* Also creates new `_CivicGksAssertionMixin` that will be used later
* This was removed in #223, but is needed for #217 (originally in #226)
* Adds `--submission-type` option to create-gks-json
close #219

* This removes 'citations' extension from statements, and instead stores these in the `reportedIn` field
close #217

* Add `CivicGksOncogenicAssertion` to support CIViC oncogenic assertions
@korikuzma korikuzma self-assigned this Jun 24, 2026
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korikuzma marked this pull request as ready for review July 13, 2026 20:41
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korikuzma marked this pull request as draft July 14, 2026 11:37
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TODO: Update VA-Spec version with pypi release

@korikuzma korikuzma linked an issue Jul 15, 2026 that may be closed by this pull request
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korikuzma marked this pull request as ready for review July 15, 2026 17:45
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korikuzma changed the base branch from issue-219 to master July 17, 2026 13:56
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GKS Exporter: Support Oncogenicity Assertions

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