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Releases: VariantEffect/mavedb-api

v2026.2.7

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@bencap bencap released this 16 Jul 23:58

What's Changed

  • deps(mavehgvs): bump mavehgvs to v0.8.0 by @bencap in #792

Full Changelog: v2026.2.6...v2026.2.7

v2026.2.6

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@bencap bencap released this 24 Jun 23:27
989fe70

What's Changed

  • Add ClinVar namespaces to public export by @bencap in #779

Full Changelog: v2026.2.5...v2026.2.6

v2026.2.5

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@bencap bencap released this 24 Jun 05:19

What's Changed

  • Bugfix/estelle/706/unique constraint to replaces by @EstelleDa in #738
  • Export mapped variants and add README for public data dump by @bencap in #728

Full Changelog: v2026.2.4...v2026.2.5

v2026.2.4

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@bencap bencap released this 10 Jun 23:07
08e9a52

What's Changed

Full Changelog: v2026.2.3...v2026.2.4

v2026.2.3

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@bencap bencap released this 21 May 18:12
2529330

What's Changed

  • fix(annotation): handle all VRS allele state types in deserialization by @bencap in #737
  • fix(authentication): handle concurrent first-login race condition by @bencap in #732

Full Changelog: v2026.2.2...v2026.2.3

v2026.2.2

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@bencap bencap released this 12 May 21:38
9247dca

What's Changed

  • Fixes a bug in ClinGen Allele ID generation that was preventing normalized alleles from being paired with their CAID
  • Fixes a bug during VEP annotation that was preventing variant recoder results from being parsed and used downstream

Full Changelog: v2026.2.1...v2026.2.2

v2026.2.1

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@bencap bencap released this 11 May 23:18
4bbfb8b

What's Changed

  • Added configurable environment variables for Variant Recoder concurrency, batch size, and ClinGen concurrency
  • Fixed a bug causing variant translation upserts to fail when run on correlated score sets at the same time
  • Increased worker timeout to 3 hours to better support long running VEP jobs

Full Changelog: v2026.2.0...v2026.2.1

v2026.2.0

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@bencap bencap released this 08 May 20:13

What's Changed

  • Clinvar namespaced variant data export by @bencap in #692
  • fix: use NOT EXISTS for superseding score set filter to prevent row m… by @bencap in #707
  • fix: filter clinical control options to current mapped variants only by @bencap in #701
  • Debug get_score_set_variants_as_csv function. by @EstelleDa in #718
  • feat: Support for Multiple Calibrations in VA-Spec Model Exports by @bencap in #658
  • Add controlled keywords to score set search filter options. by @EstelleDa in #702
  • Job Traceability, Management, and Audibility Overhaul by @bencap in #645
  • feat: Target Gene Mapping Table by @bencap in #719

Full Changelog: v2026.1.2...v2026.2.0

v2026.1.2

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@bencap bencap released this 25 Mar 01:31
380538d

What's Changed

  • fix: Search results returns fewer than expected results by @bencap in #676
  • feat: configure database connection pool via environment variables by @bencap in #681
  • fix: correct false-positive URN search tests by @bencap in #673
  • GET request for multiple score sets by @jstone-dev in #683
  • Recently published score sets by @jstone-dev in #686
  • fix: duplicate score sets appearing in GET results by @bencap in #690
  • feat: add endpoint for user created calibrations by @bencap in #689

Full Changelog: v2026.1.1...v2026.1.2

v2026.1.1

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@bencap bencap released this 03 Mar 00:27
19b77c4

What's Changed

  • fix: use na_rep instead of string 'None' for missing score and count data in CSV export by @bencap in #661
  • feat: Sortable Collections by @bencap in #660
  • chore: add ExCALIBR calibration loading script and remove deprecated PP style calibration script by @bencap in #662
  • chore: Replace generic Copilot instruction boilerplate with MaveDB-specific guidance by @bencap in #665
  • fix: don't hide published score sets from search when superseded by unpublished versions by @bencap in #667
  • Return default alphafold version when parsing or request for XML fails by @davereinhart in #670
  • feat: include additional namespaces in Zenodo CSV export by @bencap in #654
  • feat: Remove variants from calibration responses, add dedicated variant endpoints by @bencap in #663
  • feat: Broaden Score Calibration Permissions Create/Update by @bencap in #666

Full Changelog: v2026.1.0...v2026.1.1