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@NCI-GDC

Genomic Data Commons

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  1. gdc-workflow-overview gdc-workflow-overview Public

    Overview of GDC Harmonization Workflows

    43 11

  2. gdc-client gdc-client Public

    GDC Data Transfer Tool

    Python 161 45

  3. gdcdatamodel gdcdatamodel Public archive

    Translation layer between the GDC Data Dictionary and psqlgraph

    Python 28 3

  4. gdcdictionary gdcdictionary Public

    Data dictionary for the GDC

    Python 57 36

  5. psqlgraph psqlgraph Public

    Library for graph-like storage in postgresql using sqlalchemy

    Python 24 8

Repositories

Showing 10 of 91 repositories
  • gdc-frontend-framework Public
    NCI-GDC/gdc-frontend-framework's past year of commit activity
    TypeScript 14 Apache-2.0 0 0 5 Updated Nov 2, 2026
  • gdc-client Public

    GDC Data Transfer Tool

    NCI-GDC/gdc-client's past year of commit activity
    Python 161 Apache-2.0 45 19 30 Updated Oct 30, 2026
  • fastqc_to_json Public
    NCI-GDC/fastqc_to_json's past year of commit activity
    Python 0 Apache-2.0 1 0 5 Updated Oct 26, 2026
  • indexd Public Forked from uc-cdis/indexd

    Index service server

    NCI-GDC/indexd's past year of commit activity
    Python 3 Apache-2.0 22 0 17 Updated Oct 23, 2026
  • gdc-docs Public Forked from NCIP/gdc-docs

    Official repository for GDC User Guides in Markdown format

    NCI-GDC/gdc-docs's past year of commit activity
    JavaScript 64 Apache-2.0 46 0 19 Updated Oct 21, 2026
  • gdc-mutation-indexer Public

    Mutation index exports for GDC visualization

    NCI-GDC/gdc-mutation-indexer's past year of commit activity
    Python 2 Apache-2.0 2 0 19 Updated Oct 19, 2026
  • variant-filtration-tool Public

    Support tools for the GDC Variant Filtration Workflow

    NCI-GDC/variant-filtration-tool's past year of commit activity
    Python 1 Apache-2.0 2 0 4 Updated Oct 19, 2026
  • gdc-models Public

    Git repository centrally stores and serves GDC data models defined in static YAML files

    NCI-GDC/gdc-models's past year of commit activity
    Python 3 3 4 2 Updated Oct 15, 2026
  • gdc-mirnaseq-cwl Public

    CWL workflows and tools for the miRNA-Seq workflow

    NCI-GDC/gdc-mirnaseq-cwl's past year of commit activity
    Common Workflow Language 2 Apache-2.0 1 0 0 Updated Oct 7, 2026
  • gdc-dnaseq-cwl Public

    CWL for GDC DNASeq workflows

    NCI-GDC/gdc-dnaseq-cwl's past year of commit activity
    Common Workflow Language 23 Apache-2.0 13 0 3 Updated Sep 27, 2026
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