diff --git a/packages/esspolarization/.copier-answers.ess.yml b/packages/esspolarization/.copier-answers.ess.yml deleted file mode 100644 index 6425ea7cb..000000000 --- a/packages/esspolarization/.copier-answers.ess.yml +++ /dev/null @@ -1,3 +0,0 @@ -# Changes here will be overwritten by Copier; NEVER EDIT MANUALLY -_commit: 34ca4ba -_src_path: https://github.com/scipp/ess_template diff --git a/packages/esspolarization/.copier-answers.yml b/packages/esspolarization/.copier-answers.yml deleted file mode 100644 index 8d2554dcc..000000000 --- a/packages/esspolarization/.copier-answers.yml +++ /dev/null @@ -1,13 +0,0 @@ -# Changes here will be overwritten by Copier; NEVER EDIT MANUALLY -_commit: 024a41b -_src_path: gh:scipp/copier_template -description: Polarization data reduction for the European Spallation Source -max_python: '3.13' -min_python: '3.11' -namespace_package: ess -nightly_deps: scipp,sciline,scippnexus -orgname: scipp -prettyname: ESSpolarization -projectname: esspolarization -related_projects: Scipp,Sciline,ScippNexus -year: 2025 diff --git a/packages/esspolarization/README.md b/packages/esspolarization/README.md deleted file mode 100644 index 3ff811958..000000000 --- a/packages/esspolarization/README.md +++ /dev/null @@ -1,16 +0,0 @@ -[![Contributor Covenant](https://img.shields.io/badge/Contributor%20Covenant-2.1-4baaaa.svg)](CODE_OF_CONDUCT.md) -[![PyPI badge](http://img.shields.io/pypi/v/esspolarization.svg)](https://pypi.python.org/pypi/esspolarization) -[![Anaconda-Server Badge](https://anaconda.org/conda-forge/esspolarization/badges/version.svg)](https://anaconda.org/conda-forge/esspolarization) -[![License: BSD 3-Clause](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](LICENSE) - -# ESSpolarization - -## About - -Polarization data reduction for the European Spallation Source - -## Installation - -```sh -python -m pip install esspolarization -``` diff --git a/packages/esspolarization/docs/_static/anaconda-icon.js b/packages/esspolarization/docs/_static/anaconda-icon.js deleted file mode 100644 index 024350ec0..000000000 --- a/packages/esspolarization/docs/_static/anaconda-icon.js +++ /dev/null @@ -1,13 +0,0 @@ -FontAwesome.library.add( - (faListOldStyle = { - prefix: "fa-custom", - iconName: "anaconda", - icon: [ - 67.65, // viewBox width - 67.500267, // viewBox height - [], // ligature - "e001", // unicode codepoint - private use area - "M 33.900391 0 C 32.600392 0 31.299608 0.09921885 30.099609 0.19921875 A 39.81 39.81 0 0 1 35.199219 4.3007812 L 36.5 5.5 L 35.199219 6.8007812 A 34.65 34.65 0 0 0 32 10.199219 L 32 10.300781 A 6.12 6.12 0 0 0 31.5 10.900391 A 19.27 19.27 0 0 1 33.900391 10.800781 A 23 23 0 0 1 33.900391 56.800781 A 22.39 22.39 0 0 1 21.900391 53.400391 A 45.33 45.33 0 0 1 16.699219 53.699219 A 19.27 19.27 0 0 1 14.300781 53.599609 A 78.24 78.24 0 0 0 15 61.699219 A 33.26 33.26 0 0 0 33.900391 67.5 A 33.75 33.75 0 0 0 33.900391 0 z M 23 1.8007812 A 33.78 33.78 0 0 0 15.599609 5.4003906 A 47 47 0 0 1 20.699219 6.5996094 A 52.38 52.38 0 0 1 23 1.8007812 z M 26.5 2 A 41.8 41.8 0 0 0 23.699219 7.5996094 C 25.199217 8.1996088 26.69922 8.8000007 28.199219 9.5 C 28.799218 8.7000008 29.300391 8.0999999 29.400391 8 C 30.10039 7.2000008 30.800001 6.399218 31.5 5.6992188 A 58.59 58.59 0 0 0 26.5 2 z M 13.199219 8.1992188 A 48.47 48.47 0 0 0 13.099609 14.800781 A 44.05 44.05 0 0 1 18.300781 14.5 A 39.43 39.43 0 0 1 19.699219 9.5996094 A 46.94 46.94 0 0 0 13.199219 8.1992188 z M 10.099609 9.8007812 A 33.47 33.47 0 0 0 4.9003906 16.5 C 6.6003889 16 8.3992205 15.599218 10.199219 15.199219 C 10.099219 13.399221 10.099609 11.600779 10.099609 9.8007812 z M 22.599609 10.599609 C 22.19961 11.799608 21.8 13.100392 21.5 14.400391 A 29.18 29.18 0 0 1 26.199219 12.099609 A 27.49 27.49 0 0 0 22.599609 10.599609 z M 17.699219 17.5 C 16.19922 17.5 14.80078 17.599219 13.300781 17.699219 A 33.92 33.92 0 0 0 14.099609 22.099609 A 20.36 20.36 0 0 1 17.699219 17.5 z M 10.599609 17.900391 A 43.62 43.62 0 0 0 3.3007812 19.900391 L 3.0996094 20 L 3.1992188 20.199219 A 30.3 30.3 0 0 0 6.5 27.300781 L 6.5996094 27.5 L 6.8007812 27.400391 A 50.41 50.41 0 0 1 11.699219 24.300781 L 11.900391 24.199219 L 11.900391 24 A 38.39 38.39 0 0 1 10.800781 18.099609 L 10.800781 17.900391 L 10.599609 17.900391 z M 1.8007812 22.800781 L 1.5996094 23.400391 A 33.77 33.77 0 0 0 0 32.900391 L 0 33.5 L 0.40039062 33.099609 A 24.93 24.93 0 0 1 4.8007812 28.900391 L 5 28.800781 L 4.9003906 28.599609 A 54.49 54.49 0 0 1 2 23.300781 L 1.8007812 22.800781 z M 12.300781 26.300781 L 11.800781 26.599609 C 10.500783 27.399609 9.2003893 28.19961 7.9003906 29.099609 L 7.6992188 29.199219 L 8 29.400391 C 8.8999991 30.600389 9.8007822 31.900001 10.800781 33 L 11.099609 33.5 L 11.099609 32.900391 A 23.54 23.54 0 0 1 12.099609 26.900391 L 12.300781 26.300781 z M 6.0996094 30.5 L 5.9003906 30.699219 A 47 47 0 0 0 0.80078125 35.599609 L 0.59960938 35.800781 L 0.80078125 36 A 58.38 58.38 0 0 0 6.4003906 40.199219 L 6.5996094 40.300781 L 6.6992188 40.099609 A 45.3 45.3 0 0 1 9.6992188 35.5 L 9.8007812 35.300781 L 9.6992188 35.199219 A 52 52 0 0 1 6.1992188 30.800781 L 6.0996094 30.5 z M 11.300781 36.400391 L 11 36.900391 C 10.100001 38.200389 9.2003898 39.600001 8.4003906 41 L 8.3007812 41.199219 L 8.5 41.300781 C 9.8999986 42.10078 11.400392 42.800001 12.900391 43.5 L 13.400391 43.699219 L 13.199219 43.199219 A 23.11 23.11 0 0 1 11.400391 37 L 11.300781 36.400391 z M 0.099609375 37.699219 L 0.19921875 38.300781 A 31.56 31.56 0 0 0 2.9003906 47.699219 L 3.0996094 48.199219 L 3.3007812 47.699219 A 55.47 55.47 0 0 1 5.6992188 42.099609 L 5.8007812 41.800781 L 5.5996094 41.699219 A 57.36 57.36 0 0 1 0.59960938 38.099609 L 0.099609375 37.699219 z M 7.4003906 42.800781 L 7.3007812 43 A 53.76 53.76 0 0 0 4.5 50 L 4.4003906 50.199219 L 4.5996094 50.300781 A 39.14 39.14 0 0 0 12.199219 51.699219 L 12.5 51.699219 L 12.5 51.5 A 36.79 36.79 0 0 1 13 45.699219 L 13 45.5 L 12.800781 45.400391 A 49.67 49.67 0 0 1 7.5996094 42.900391 L 7.4003906 42.800781 z M 14.5 45.900391 L 14.5 46.199219 A 45.53 45.53 0 0 0 14.099609 51.5 L 14.099609 51.699219 L 14.300781 51.699219 C 15.10078 51.699219 15.89922 51.800781 16.699219 51.800781 A 12.19 12.19 0 0 0 19.400391 51.800781 L 20 51.800781 L 19.5 51.400391 A 20.73 20.73 0 0 1 14.900391 46.199219 L 14.900391 46.099609 L 14.5 45.900391 z M 5.1992188 52.099609 L 5.5 52.599609 A 34.87 34.87 0 0 0 12.599609 60.400391 L 13 60.800781 L 13 60.099609 A 51.43 51.43 0 0 1 12.5 53.5 L 12.5 53.300781 L 12.300781 53.300781 A 51.94 51.94 0 0 1 5.8007812 52.199219 L 5.1992188 52.099609 z" - ], - }) -); diff --git a/packages/esspolarization/docs/_templates/class-template.rst b/packages/esspolarization/docs/_templates/class-template.rst deleted file mode 100644 index 0200267d2..000000000 --- a/packages/esspolarization/docs/_templates/class-template.rst +++ /dev/null @@ -1,31 +0,0 @@ -{{ fullname | escape | underline }} - -.. currentmodule:: {{ module }} - -.. autoclass:: {{ objname }} - :members: - :special-members: __getitem__ - - {% block methods %} - .. automethod:: __init__ - - {% if methods %} - .. rubric:: {{ _('Methods') }} - - .. autosummary:: - {% for item in methods %} - ~{{ name }}.{{ item }} - {%- endfor %} - {% endif %} - {% endblock %} - - {% block attributes %} - {% if attributes %} - .. rubric:: {{ _('Attributes') }} - - .. autosummary:: - {% for item in attributes %} - ~{{ name }}.{{ item }} - {%- endfor %} - {% endif %} - {% endblock %} diff --git a/packages/esspolarization/docs/_templates/doc_version.html b/packages/esspolarization/docs/_templates/doc_version.html deleted file mode 100644 index 5bf36be37..000000000 --- a/packages/esspolarization/docs/_templates/doc_version.html +++ /dev/null @@ -1,2 +0,0 @@ - -Current ESSpolarization version: {{ version }} (older versions). diff --git a/packages/esspolarization/docs/_templates/module-template.rst b/packages/esspolarization/docs/_templates/module-template.rst deleted file mode 100644 index 6fee8d776..000000000 --- a/packages/esspolarization/docs/_templates/module-template.rst +++ /dev/null @@ -1,66 +0,0 @@ -{{ fullname | escape | underline}} - -.. automodule:: {{ fullname }} - - {% block attributes %} - {% if attributes %} - .. rubric:: {{ _('Module Attributes') }} - - .. autosummary:: - :toctree: - {% for item in attributes %} - {{ item }} - {%- endfor %} - {% endif %} - {% endblock %} - - {% block functions %} - {% if functions %} - .. rubric:: {{ _('Functions') }} - - .. autosummary:: - :toctree: - {% for item in functions %} - {{ item }} - {%- endfor %} - {% endif %} - {% endblock %} - - {% block classes %} - {% if classes %} - .. rubric:: {{ _('Classes') }} - - .. autosummary:: - :toctree: - :template: class-template.rst - {% for item in classes %} - {{ item }} - {%- endfor %} - {% endif %} - {% endblock %} - - {% block exceptions %} - {% if exceptions %} - .. rubric:: {{ _('Exceptions') }} - - .. autosummary:: - :toctree: - {% for item in exceptions %} - {{ item }} - {%- endfor %} - {% endif %} - {% endblock %} - -{% block modules %} -{% if modules %} -.. rubric:: Modules - -.. autosummary:: - :toctree: - :template: module-template.rst - :recursive: -{% for item in modules %} - {{ item }} -{%- endfor %} -{% endif %} -{% endblock %} diff --git a/packages/esspolarization/docs/about/index.md b/packages/esspolarization/docs/about/index.md deleted file mode 100644 index bad224c7e..000000000 --- a/packages/esspolarization/docs/about/index.md +++ /dev/null @@ -1,26 +0,0 @@ -# About - -## Development - -ESSpolarization is an open source project by the [European Spallation Source ERIC](https://ess.eu/) (ESS). - -## License - -ESSpolarization is available as open source under the [BSD-3 license](https://opensource.org/license/BSD-3-Clause). - -## Citing ESSpolarization - -Please cite the following: - -[![DOI](https://zenodo.org/badge/FIXME.svg)](https://zenodo.org/doi/10.5281/zenodo.FIXME) - -To cite a specific version of ESSpolarization, select the desired version on Zenodo to get the corresponding DOI. - -## Older versions of the documentation - -Older versions of the documentation pages can be found under the assets of each [release](https://github.com/scipp/esspolarization/releases). -Simply download the archive, unzip and view locally in a web browser. - -## Source code and development - -ESSpolarization is hosted and developed [on GitHub](https://github.com/scipp/esspolarization). diff --git a/packages/esspolarization/docs/api-reference/index.md b/packages/esspolarization/docs/api-reference/index.md deleted file mode 100644 index 6edc7fc5f..000000000 --- a/packages/esspolarization/docs/api-reference/index.md +++ /dev/null @@ -1,70 +0,0 @@ -# API Reference - -## Workflows - -```{eval-rst} -.. currentmodule:: ess.polarization - -.. autosummary:: - :toctree: ../generated/classes - :template: class-template.rst - :recursive: - - CorrectionWorkflow - He3CellWorkflow - HalfPolarizedWorkflow - PolarizationAnalysisWorkflow - SupermirrorWorkflow -``` - -## Classes - -```{eval-rst} -.. currentmodule:: ess.polarization - -.. autosummary:: - :toctree: ../generated/classes - :template: class-template.rst - :recursive: - - Analyzer - Depolarized - DirectBeamBackgroundQRange - DirectBeamNoCell - DirectBeamQRange - Down - EfficiencyLookupTable - HalfPolarizedCorrectedData - He3CellLength - He3CellPressure - He3DirectBeam - He3FillingTime - He3OpacityFunction - He3PolarizationFunction - He3TransmissionFunction - He3TransmissionEmptyGlass - PolarizationCorrectedData - Polarized - Polarizer - SecondDegreePolynomialEfficiency - SupermirrorEfficiencyFunction - TotalPolarizationCorrectedData - Up -``` - -## Top-level functions - -```{eval-rst} -.. autosummary:: - :toctree: ../generated/functions - :recursive: -``` - -## Submodules - -```{eval-rst} -.. autosummary:: - :toctree: ../generated/modules - :template: module-template.rst - :recursive: -``` diff --git a/packages/esspolarization/docs/conf.py b/packages/esspolarization/docs/conf.py deleted file mode 100644 index 20837d7b0..000000000 --- a/packages/esspolarization/docs/conf.py +++ /dev/null @@ -1,272 +0,0 @@ -# SPDX-License-Identifier: BSD-3-Clause -# Copyright (c) 2025 Scipp contributors (https://github.com/scipp) - -import doctest -import os -import sys -from importlib.metadata import PackageNotFoundError -from importlib.metadata import version as get_version - -from sphinx.util import logging - -sys.path.insert(0, os.path.abspath('.')) - -logger = logging.getLogger(__name__) - -# General information about the project. -project = 'ESSpolarization' -copyright = '2025 Scipp contributors' -author = 'Scipp contributors' - -html_show_sourcelink = True - -extensions = [ - 'sphinx.ext.autodoc', - 'sphinx.ext.autosummary', - 'sphinx.ext.doctest', - 'sphinx.ext.githubpages', - 'sphinx.ext.intersphinx', - 'sphinx.ext.mathjax', - 'sphinx.ext.napoleon', - 'sphinx.ext.viewcode', - 'sphinx_autodoc_typehints', - 'sphinx_copybutton', - 'sphinx_design', - 'sphinxcontrib.mermaid', - 'sphinxcontrib.autodoc_pydantic', - 'nbsphinx', - 'myst_parser', -] - -try: - import sciline.sphinxext.domain_types # noqa: F401 - - extensions.append('sciline.sphinxext.domain_types') - # See https://github.com/tox-dev/sphinx-autodoc-typehints/issues/457 - suppress_warnings = ["config.cache"] -except ModuleNotFoundError: - pass - - -myst_enable_extensions = [ - "amsmath", - "colon_fence", - "deflist", - "dollarmath", - "fieldlist", - "html_admonition", - "html_image", - "replacements", - "smartquotes", - "strikethrough", - "substitution", - "tasklist", -] - -myst_heading_anchors = 3 - -autodoc_type_aliases = { - 'array_like': 'array_like', -} - -intersphinx_mapping = { - 'python': ('https://docs.python.org/3', None), - 'numpy': ('https://numpy.org/doc/stable/', None), - 'scipp': ('https://scipp.github.io/', None), -} - -# autodocs includes everything, even irrelevant API internals. autosummary -# looks more suitable in the long run when the API grows. -# For a nice example see how xarray handles its API documentation. -autosummary_generate = True - -napoleon_google_docstring = False -napoleon_numpy_docstring = True -napoleon_use_param = True -napoleon_use_rtype = False -napoleon_preprocess_types = True -napoleon_type_aliases = { - # objects without namespace: numpy - "ndarray": "~numpy.ndarray", -} -typehints_defaults = 'comma' -typehints_use_rtype = False - - -sciline_domain_types_prefix = 'ess.polarization' -sciline_domain_types_aliases = { - 'scipp._scipp.core.DataArray': 'scipp.DataArray', - 'scipp._scipp.core.Dataset': 'scipp.Dataset', - 'scipp._scipp.core.DType': 'scipp.DType', - 'scipp._scipp.core.Unit': 'scipp.Unit', - 'scipp._scipp.core.Variable': 'scipp.Variable', - 'scipp.core.data_group.DataGroup': 'scipp.DataGroup', -} - - -# Add any paths that contain templates here, relative to this directory. -templates_path = ['_templates'] - -# The suffix(es) of source filenames. -# You can specify multiple suffix as a list of string: -# -source_suffix = ['.rst', '.md'] -html_sourcelink_suffix = '' # Avoid .ipynb.txt extensions in sources - -# The master toctree document. -master_doc = 'index' - -# The version info for the project you're documenting, acts as replacement for -# |version| and |release|, also used in various other places throughout the -# built documents. -# - -try: - release = get_version("esspolarization") - version = ".".join(release.split('.')[:3]) # CalVer -except PackageNotFoundError: - logger.info( - "Warning: determining version from package metadata failed, falling back to " - "a dummy version number." - ) - release = version = "0.0.0-dev" - -warning_is_error = True - -# The language for content autogenerated by Sphinx. Refer to documentation -# for a list of supported languages. -# -# This is also used if you do content translation via gettext catalogs. -# Usually you set "language" from the command line for these cases. -language = "en" - -# List of patterns, relative to source directory, that match files and -# directories to ignore when looking for source files. -# This patterns also effect to html_static_path and html_extra_path -exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store', '**.ipynb_checkpoints'] - -# The name of the Pygments (syntax highlighting) style to use. -pygments_style = 'sphinx' - -# If true, `todo` and `todoList` produce output, else they produce nothing. -todo_include_todos = False - -# -- Options for HTML output ---------------------------------------------- - -html_theme = "pydata_sphinx_theme" -html_theme_options = { - "primary_sidebar_end": ["edit-this-page", "sourcelink"], - "secondary_sidebar_items": [], - "navbar_persistent": ["search-button"], - "show_nav_level": 1, - # Adjust this to ensure external links are moved to "Move" menu - "header_links_before_dropdown": 4, - "pygment_light_style": "github-light-high-contrast", - "pygment_dark_style": "github-dark-high-contrast", - "logo": { - "image_light": "_static/logo.svg", - "image_dark": "_static/logo-dark.svg", - }, - "external_links": [ - {"name": "Sciline", "url": "https://scipp.github.io/sciline"}, - {"name": "Scipp", "url": "https://scipp.github.io"}, - {"name": "ScippNexus", "url": "https://scipp.github.io/scippnexus"}, - ], - "icon_links": [ - { - "name": "GitHub", - "url": "https://github.com/scipp/esspolarization", - "icon": "fa-brands fa-github", - "type": "fontawesome", - }, - { - "name": "PyPI", - "url": "https://pypi.org/project/esspolarization/", - "icon": "fa-brands fa-python", - "type": "fontawesome", - }, - { - "name": "Conda", - "url": "https://anaconda.org/conda-forge/esspolarization", - "icon": "fa-custom fa-anaconda", - "type": "fontawesome", - }, - ], - "footer_start": ["copyright", "sphinx-version"], - "footer_end": ["doc_version", "theme-version"], -} -html_context = { - "doc_path": "docs", -} -html_sidebars = { - "**": ["sidebar-nav-bs", "page-toc"], -} - -html_title = "ESSpolarization" -html_logo = "_static/logo.svg" -html_favicon = "_static/favicon.ico" - -# Add any paths that contain custom static files (such as style sheets) here, -# relative to this directory. They are copied after the builtin static files, -# so a file named "default.css" will overwrite the builtin "default.css". -html_static_path = ['_static'] -html_css_files = [] -html_js_files = ["anaconda-icon.js"] - -# -- Options for HTMLHelp output ------------------------------------------ - -# Output file base name for HTML help builder. -htmlhelp_basename = 'esspolarizationdoc' - -# -- Options for Matplotlib in notebooks ---------------------------------- - -nbsphinx_execute_arguments = [ - "--Session.metadata=scipp_sphinx_build=True", -] - -# -- Options for doctest -------------------------------------------------- - -# sc.plot returns a Figure object and doctest compares that against the -# output written in the docstring. But we only want to show an image of the -# figure, not its `repr`. -# In addition, there is no need to make plots in doctest as the documentation -# build already tests if those plots can be made. -# So we simply disable plots in doctests. -doctest_global_setup = ''' -import numpy as np - -try: - import scipp as sc - - def do_not_plot(*args, **kwargs): - pass - - sc.plot = do_not_plot - sc.Variable.plot = do_not_plot - sc.DataArray.plot = do_not_plot - sc.DataGroup.plot = do_not_plot - sc.Dataset.plot = do_not_plot -except ImportError: - # Scipp is not needed by docs if it is not installed. - pass -''' - -# Using normalize whitespace because many __str__ functions in scipp produce -# extraneous empty lines and it would look strange to include them in the docs. -doctest_default_flags = ( - doctest.ELLIPSIS - | doctest.IGNORE_EXCEPTION_DETAIL - | doctest.DONT_ACCEPT_TRUE_FOR_1 - | doctest.NORMALIZE_WHITESPACE -) - -# -- Options for linkcheck ------------------------------------------------ - -linkcheck_ignore = [ - # Specific lines in Github blobs cannot be found by linkcheck. - r'https?://github\.com/.*?/blob/[a-f0-9]+/.+?#', - # Linkcheck seems to be denied access by some DOI resolvers. - # Since DOIs are supposed to be permanent, we don't need to check them.' - r'https?://doi\.org/', - r'https?://dx\.doi\.org/', -] diff --git a/packages/esspolarization/docs/developer/coding-conventions.md b/packages/esspolarization/docs/developer/coding-conventions.md deleted file mode 100644 index 4fafc18db..000000000 --- a/packages/esspolarization/docs/developer/coding-conventions.md +++ /dev/null @@ -1,117 +0,0 @@ -# Coding conventions - -## Code formatting - -There are no explicit code formatting conventions since we use `ruff` to enforce a format. - -## Docstring format - -We use the [NumPy docstring format](https://www.sphinx-doc.org/en/master/usage/extensions/example_numpy.html). -We use `sphinx-autodocs-typehints` to automatically insert type hints into the docstrings. -Our format thus deviates from the default NumPy example given by the link above. -Docstrings should therefore be laid out as follows, including spacing and punctuation: - -```python - -def foo(x: int, y: float) -> float: - """Short description. - - Long description. - - With multiple paragraphs. - - Warning - ------- - Be careful! - - Parameters - ---------- - x: - First input. - y: - Second input. - - Returns - ------- - : - The result. - - Raises - ------ - ValueError - If the input is bad. - IndexError - If some lookup failed. - - See Also - -------- - scitacean.bar: - A bit less foo. - - Examples - -------- - This is how to use it: - - >>> foo(1, 2) - 3 - - And also: - - >>> foo(1, 3) - 6 - """ -``` - -The order of sections is fixed as shown in the example. - -- **Short description** (*required*) A single sentence describing the purpose of the function / class. -- **Long description** (*optional*) One or more paragraphs of detailed explanations. - Can include additional sections like `Warning` or `Hint`. -- **Parameters** (*required for functions*) List of all function arguments including their name but not their type. - Listing arguments like this can seem ridiculous if the explanation is as devoid of content as in the example. - But it is still required in order for sphinx to show the types. -- **Returns** (*required for functions*) Description of the return value. - Required for the same reason as the parameter list. - - For a single return value, neither a name nor type should be given. - But a colon is required as in the example above in order to produce proper formatting. - - For multiple return values, to produce proper formatting, - both name and type must be given even though the latter repeats the type annotation: - - ```python - - """ - Returns - ------- - n: int - The first return value. - z: float - The second return value. - """ - ``` - -- **Raises** (*optional*) We generally do not document what exceptions can be raised from a function. - But if there are some important cases, this section can list those exceptions with an explanation - of when the exception is raised. - The exception type is required. - Note that there are no colons here. -- **See Also** (*optional*) List of related functions and/or classes. - The function/class name should include the module it is in but without reST markup. - For simple cases, the explanation can be left out. - In this case, the colon should be omitted as well and multiple entries must be separated by commas. -- **Examples** (*optional*) Example code given using `>>>` as the Python prompt. - May include text before, after, and between code blocks. - Note the spacing in the example. - -Some functions can be sufficiently described by a single sentence. -In this case, the 'Parameters' and 'Returns' sections may be omitted and the docstring should be laid out on a single line. -If it does not fit on a single line, it is too complicated. -For example - -```python -def bar(self) -> int: - """Returns the number of dimensions.""" -``` - -Note that the argument types are not shown in the rendered documentation. diff --git a/packages/esspolarization/docs/developer/dependency-management.md b/packages/esspolarization/docs/developer/dependency-management.md deleted file mode 100644 index 02cb83df9..000000000 --- a/packages/esspolarization/docs/developer/dependency-management.md +++ /dev/null @@ -1,13 +0,0 @@ -# Dependency management - -esspolarization is a library, so the package dependencies are never pinned. -Lower bounds are fine and individual versions can be excluded. -See, e.g., [Should You Use Upper Bound Version Constraints](https://iscinumpy.dev/post/bound-version-constraints/) for an explanation. - -Development dependencies (as opposed to dependencies of the deployed package that users need to install) are pinned to an exact version in order to ensure reproducibility. -This also includes dependencies used for the various CI builds. -This is done by specifying packages (and potential version constraints) in `requirements/*.in` files and locking those dependencies using [pip-compile-multi](https://pip-compile-multi.readthedocs.io/en/latest/index.html) to produce `requirements/*.txt` files. -Those files are then used by [tox](https://tox.wiki/en/latest/) to create isolated environments and run tests, build docs, etc. - -`tox` can be cumbersome to use for local development. -Therefore `requirements/dev.txt` can be used to create a virtual environment with all dependencies. diff --git a/packages/esspolarization/docs/developer/getting-started.md b/packages/esspolarization/docs/developer/getting-started.md deleted file mode 100644 index a76675116..000000000 --- a/packages/esspolarization/docs/developer/getting-started.md +++ /dev/null @@ -1,91 +0,0 @@ -# Getting started - -## Setting up - -### Dependencies - -Development dependencies are specified in `requirements/dev.txt` and can be installed using (see [Dependency Management](./dependency-management.md) for more information) - -```sh -pip install -r requirements/dev.txt -``` - -Additionally, building the documentation requires [pandoc](https://pandoc.org/) which is not on PyPI and needs to be installed through other means, e.g. with your OS package manager. - -### Install the package - -Install the package in editable mode using - -```sh -pip install -e . -``` - -### Set up git hooks - -The CI pipeline runs a number of code formatting and static analysis tools. -If they fail, a build is rejected. -To avoid that, you can run the same tools locally. -This can be done conveniently using [pre-commit](https://pre-commit.com/): - -```sh -pre-commit install -``` - -Alternatively, if you want a different workflow, take a look at ``tox.ini`` or ``.pre-commit.yaml`` to see what tools are run and how. - -## Running tests - -`````{tab-set} -````{tab-item} tox -Run the tests using - -```sh -tox -e py311 -``` - -(or just `tox` if you want to run all environments). - -```` -````{tab-item} Manually -Run the tests using - -```sh -python -m pytest -``` -```` -````` - -## Building the docs - -`````{tab-set} -````{tab-item} tox -Build the documentation using - -```sh -tox -e docs -``` - -This builds the docs and also runs `doctest`. -`linkcheck` can be run separately using - -```sh -tox -e linkcheck -``` -```` - -````{tab-item} Manually - -Build the documentation using - -```sh -python -m sphinx -v -b html -d .tox/docs_doctrees docs html -``` - -Additionally, test the documentation using - -```sh -python -m sphinx -v -b doctest -d .tox/docs_doctrees docs html -python -m sphinx -v -b linkcheck -d .tox/docs_doctrees docs html -``` -```` -````` \ No newline at end of file diff --git a/packages/esspolarization/docs/developer/index.md b/packages/esspolarization/docs/developer/index.md deleted file mode 100644 index 9dc534a3b..000000000 --- a/packages/esspolarization/docs/developer/index.md +++ /dev/null @@ -1,16 +0,0 @@ -# Development - -```{include} ../../CONTRIBUTING.md -``` - -## Table of contents - -```{toctree} ---- -maxdepth: 2 ---- - -getting-started -coding-conventions -dependency-management -``` diff --git a/packages/esspolarization/docs/index.md b/packages/esspolarization/docs/index.md deleted file mode 100644 index d1192b914..000000000 --- a/packages/esspolarization/docs/index.md +++ /dev/null @@ -1,49 +0,0 @@ -:::{image} _static/logo.svg -:class: only-light -:alt: ESSpolarization -:width: 60% -:align: center -::: -:::{image} _static/logo-dark.svg -:class: only-dark -:alt: ESSpolarization -:width: 60% -:align: center -::: - -```{raw} html - -``` - -```{role} transparent -``` - -# {transparent}`ESSpolarization` - -
- Polarization data reduction for the European Spallation Source -

-
- -:::{include} user-guide/installation.md -:heading-offset: 1 -::: - -## Get in touch - -- If you have questions that are not answered by these documentation pages, ask on [discussions](https://github.com/scipp/esspolarization/discussions). Please include a self-contained reproducible example if possible. -- Report bugs (including unclear, missing, or wrong documentation!), suggest features or view the source code [on GitHub](https://github.com/scipp/esspolarization). - -```{toctree} ---- -hidden: ---- - -user-guide/index -api-reference/index -developer/index -about/index -``` diff --git a/packages/esspolarization/docs/user-guide/installation.md b/packages/esspolarization/docs/user-guide/installation.md deleted file mode 100644 index 5e0a822a9..000000000 --- a/packages/esspolarization/docs/user-guide/installation.md +++ /dev/null @@ -1,16 +0,0 @@ -# Installation - -To install ESSpolarization and all of its dependencies, use - -`````{tab-set} -````{tab-item} pip -```sh -pip install esspolarization -``` -```` -````{tab-item} conda -```sh -conda install -c conda-forge esspolarization -``` -```` -````` diff --git a/packages/esspolarization/pyproject.toml b/packages/esspolarization/pyproject.toml deleted file mode 100644 index 169685158..000000000 --- a/packages/esspolarization/pyproject.toml +++ /dev/null @@ -1,99 +0,0 @@ -[build-system] -requires = [ - "setuptools>=77", - "setuptools_scm[toml]>=8.0", -] -build-backend = "setuptools.build_meta" - -[project] -name = "esspolarization" -description = "Polarization data reduction for the European Spallation Source" -authors = [{ name = "Scipp contributors" }] -license = "BSD-3-Clause" -license-files = ["../../LICENSE"] -readme = "README.md" -classifiers = [ - "Intended Audience :: Science/Research", - "Natural Language :: English", - "Operating System :: OS Independent", - "Programming Language :: Python :: 3", - "Programming Language :: Python :: 3 :: Only", - "Programming Language :: Python :: 3.11", - "Programming Language :: Python :: 3.12", - "Programming Language :: Python :: 3.13", - "Topic :: Scientific/Engineering", - "Typing :: Typed", -] -requires-python = ">=3.11" - -# IMPORTANT: -# Run 'tox -e deps' after making changes here. This will update requirement files. -# Make sure to list one dependency per line. -dependencies = [ - "dask>=2022.1.0", - "graphviz", - "sciline>=25.04.1", - "scipp>=23.8.0", - "scipy>=1.14", - "essreduce>=24.07.1", -] - -dynamic = ["version"] - -[project.optional-dependencies] -test = [ - "pytest>=7.0", - "pandas>=2.1.2", - "pooch>=1.5", -] -docs = [ - "esssans", - "autodoc-pydantic", - "ipykernel", - # Breaks syntax highlighting in Jupyter code cells. - "ipython!=8.7.0", - "myst-parser", - "nbsphinx", - "pydata-sphinx-theme>=0.14", - "sphinx", - "sphinx-autodoc-typehints", - "sphinx-copybutton", - "sphinx-design", - "sphinxcontrib-mermaid", - "sympy", -] - -[project.urls] -"Bug Tracker" = "https://github.com/scipp/esspolarization/issues" -"Documentation" = "https://scipp.github.io/esspolarization" -"Source" = "https://github.com/scipp/esspolarization" - -[tool.setuptools_scm] -root = "../.." -tag_regex = "^esspolarization/(?P[vV]?\\d+(?:\\.\\d+)*(?:[._-]?\\w+)*)$" -git_describe_command = ["git", "describe", "--dirty", "--tags", "--long", "--match", "esspolarization/*[0-9]*"] - -[tool.pytest.ini_options] -minversion = "7.0" -addopts = """ ---strict-config ---strict-markers ---import-mode=importlib --ra --v -""" -testpaths = "tests" -filterwarnings = [ - "error", -] - - -[tool.mypy] -strict = true -ignore_missing_imports = true -enable_error_code = [ - "ignore-without-code", - "redundant-expr", - "truthy-bool", -] -warn_unreachable = true diff --git a/packages/esspolarization/tests/package_test.py b/packages/esspolarization/tests/package_test.py deleted file mode 100644 index 2bcc0cc5b..000000000 --- a/packages/esspolarization/tests/package_test.py +++ /dev/null @@ -1,20 +0,0 @@ -# SPDX-License-Identifier: BSD-3-Clause -# Copyright (c) 2025 Scipp contributors (https://github.com/scipp) - -"""Tests of package integrity. - -Note that additional imports need to be added for repositories that -contain multiple packages. -""" - -from ess import polarization as pkg - - -def test_has_version(): - assert hasattr(pkg, '__version__') - - -# This is for CI package tests. They need to run tests with minimal dependencies, -# that is, without installing pytest. This code does not affect pytest. -if __name__ == '__main__': - test_has_version() diff --git a/packages/essreduce/docs/conf.py b/packages/essreduce/docs/conf.py index 30f494bbd..d97364360 100644 --- a/packages/essreduce/docs/conf.py +++ b/packages/essreduce/docs/conf.py @@ -33,6 +33,7 @@ 'sphinx_copybutton', 'sphinx_design', 'sphinxcontrib.autodoc_pydantic', + 'sphinxcontrib.mermaid', 'nbsphinx', 'myst_parser', ] diff --git a/packages/essreduce/docs/user-guide/index.md b/packages/essreduce/docs/user-guide/index.md index 1c91655cb..de84fc162 100644 --- a/packages/essreduce/docs/user-guide/index.md +++ b/packages/essreduce/docs/user-guide/index.md @@ -6,6 +6,7 @@ maxdepth: 2 --- installation +polarization/index unwrap/index widget reduction-workflow-guidelines diff --git a/packages/esspolarization/docs/user-guide/index.md b/packages/essreduce/docs/user-guide/polarization/index.md similarity index 95% rename from packages/esspolarization/docs/user-guide/index.md rename to packages/essreduce/docs/user-guide/polarization/index.md index 3217f304b..f0cfb24bb 100644 --- a/packages/esspolarization/docs/user-guide/index.md +++ b/packages/essreduce/docs/user-guide/polarization/index.md @@ -1,6 +1,4 @@ -# User Guide - -## Overview +# Polarization ```{mermaid} graph TD @@ -22,8 +20,6 @@ graph TD style H fill:yellowgreen ``` -## Content - ```{toctree} --- maxdepth: 1 diff --git a/packages/esspolarization/docs/user-guide/inverse_of_polarization_matrices.ipynb b/packages/essreduce/docs/user-guide/polarization/inverse_of_polarization_matrices.ipynb similarity index 100% rename from packages/esspolarization/docs/user-guide/inverse_of_polarization_matrices.ipynb rename to packages/essreduce/docs/user-guide/polarization/inverse_of_polarization_matrices.ipynb diff --git a/packages/esspolarization/docs/user-guide/sans-polarization-analysis-methodology.ipynb b/packages/essreduce/docs/user-guide/polarization/sans-polarization-analysis-methodology.ipynb similarity index 100% rename from packages/esspolarization/docs/user-guide/sans-polarization-analysis-methodology.ipynb rename to packages/essreduce/docs/user-guide/polarization/sans-polarization-analysis-methodology.ipynb diff --git a/packages/esspolarization/docs/user-guide/workflow.ipynb b/packages/essreduce/docs/user-guide/polarization/workflow.ipynb similarity index 96% rename from packages/esspolarization/docs/user-guide/workflow.ipynb rename to packages/essreduce/docs/user-guide/polarization/workflow.ipynb index d38fbb7ac..833b7dd60 100644 --- a/packages/esspolarization/docs/user-guide/workflow.ipynb +++ b/packages/essreduce/docs/user-guide/polarization/workflow.ipynb @@ -17,7 +17,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess import polarization as pol\n", + "from ess.reduce import polarization as pol\n", "\n", "print(pol.he3.He3CellWorkflow.__doc__)" ] @@ -110,7 +110,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess import polarization as pol\n", + "from ess.reduce import polarization as pol\n", "\n", "workflow = pol.supermirror.SupermirrorWorkflow()\n", "print(workflow.__doc__)" @@ -207,7 +207,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess.polarization.correction import CorrectionWorkflow\n", + "from ess.reduce.polarization.correction import CorrectionWorkflow\n", "\n", "workflow = CorrectionWorkflow()\n", "workflow.visualize(results, graph_attr={\"rankdir\": \"LR\"})" @@ -226,7 +226,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess.polarization.correction import CorrectionWorkflow\n", + "from ess.reduce.polarization.correction import CorrectionWorkflow\n", "\n", "results = (\n", " pol.HalfPolarizedCorrectedData[pol.Up],\n", diff --git a/packages/esspolarization/docs/user-guide/zoom.ipynb b/packages/essreduce/docs/user-guide/polarization/zoom.ipynb similarity index 98% rename from packages/esspolarization/docs/user-guide/zoom.ipynb rename to packages/essreduce/docs/user-guide/polarization/zoom.ipynb index 7a89e4202..dd0ce6c38 100644 --- a/packages/esspolarization/docs/user-guide/zoom.ipynb +++ b/packages/essreduce/docs/user-guide/polarization/zoom.ipynb @@ -21,7 +21,7 @@ "import plopp\n", "import sciline\n", "import scipp as sc\n", - "from ess import polarization as pol\n", + "from ess.reduce import polarization as pol\n", "from ess import sans\n", "from ess import isissans as isis\n", "import ess.isissans.data # noqa: F401\n", @@ -87,7 +87,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess.polarization.zoom import ZoomTransmissionFractionWorkflow\n", + "from ess.reduce.polarization.zoom import ZoomTransmissionFractionWorkflow\n", "\n", "sans_workflow = ZoomTransmissionFractionWorkflow(cell_runs)\n", "for key, value in params.items():\n", @@ -594,7 +594,7 @@ "metadata": {}, "outputs": [], "source": [ - "from ess.polarization.data import example_polarization_efficiency_table\n", + "from ess.reduce.polarization.data import example_polarization_efficiency_table\n", "\n", "supermirror_workflow[pol.SupermirrorEfficiencyFunction[pol.Polarizer]] = (\n", " pol.EfficiencyLookupTable.from_file(\n", diff --git a/packages/essreduce/pyproject.toml b/packages/essreduce/pyproject.toml index 67985d8bd..483d66ac7 100644 --- a/packages/essreduce/pyproject.toml +++ b/packages/essreduce/pyproject.toml @@ -30,22 +30,24 @@ requires-python = ">=3.11" dynamic = ["version"] dependencies = [ + "dask>=2022.1.0", + "graphviz>=0.20", "sciline>=25.11.0", "scipp>=26.3.1", "scippneutron>=25.11.1", "scippnexus>=25.06.0", + "scipy>=1.14", ] [project.optional-dependencies] test = [ - "graphviz>=0.20", "ipywidgets>=8.1", "matplotlib>=3.10.7", "numba>=0.63", "pooch>=1.9.0", "pytest>=7.0", - "scipy>=1.14", "tof>=25.12.0", + "pandas>=2.1.2", ] docs = [ "autodoc-pydantic", @@ -63,6 +65,8 @@ docs = [ "sphinx-copybutton", "sphinx-design", "tof>=25.12.0", + "sphinxcontrib-mermaid", + "sympy", ] [project.scripts] diff --git a/packages/essreduce/src/ess/reduce/__init__.py b/packages/essreduce/src/ess/reduce/__init__.py index 1ce5144fa..873581316 100644 --- a/packages/essreduce/src/ess/reduce/__init__.py +++ b/packages/essreduce/src/ess/reduce/__init__.py @@ -3,7 +3,7 @@ import importlib.metadata -from . import nexus, normalization, uncertainty, unwrap +from . import nexus, normalization, polarization, uncertainty, unwrap try: __version__ = importlib.metadata.version("essreduce") @@ -12,4 +12,4 @@ del importlib -__all__ = ["nexus", "normalization", "uncertainty", "unwrap"] +__all__ = ["nexus", "normalization", "polarization", "uncertainty", "unwrap"] diff --git a/packages/esspolarization/src/ess/polarization/__init__.py b/packages/essreduce/src/ess/reduce/polarization/__init__.py similarity index 89% rename from packages/esspolarization/src/ess/polarization/__init__.py rename to packages/essreduce/src/ess/reduce/polarization/__init__.py index e465650b7..564b84f51 100644 --- a/packages/esspolarization/src/ess/polarization/__init__.py +++ b/packages/essreduce/src/ess/reduce/polarization/__init__.py @@ -1,16 +1,7 @@ # SPDX-License-Identifier: BSD-3-Clause # Copyright (c) 2025 Scipp contributors (https://github.com/scipp) -# ruff: noqa: E402, F401, I - -import importlib.metadata - -try: - __version__ = importlib.metadata.version("esspolarization") -except importlib.metadata.PackageNotFoundError: - __version__ = "0.0.0" - -del importlib +"""Utilities for processing polarized neutron data.""" from .correction import ( CorrectionWorkflow, @@ -78,6 +69,7 @@ "NoAnalyzer", "PolarizationAnalysisWorkflow", "PolarizationCorrectedData", + "Polarized", "Polarizer", "PolarizingElement", "ReducedSampleDataBySpinChannel", diff --git a/packages/esspolarization/src/ess/polarization/base.py b/packages/essreduce/src/ess/reduce/polarization/base.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/base.py rename to packages/essreduce/src/ess/reduce/polarization/base.py diff --git a/packages/esspolarization/src/ess/polarization/correction.py b/packages/essreduce/src/ess/reduce/polarization/correction.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/correction.py rename to packages/essreduce/src/ess/reduce/polarization/correction.py diff --git a/packages/esspolarization/src/ess/polarization/data.py b/packages/essreduce/src/ess/reduce/polarization/data.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/data.py rename to packages/essreduce/src/ess/reduce/polarization/data.py diff --git a/packages/esspolarization/src/ess/polarization/he3.py b/packages/essreduce/src/ess/reduce/polarization/he3.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/he3.py rename to packages/essreduce/src/ess/reduce/polarization/he3.py diff --git a/packages/esspolarization/src/ess/polarization/py.typed b/packages/essreduce/src/ess/reduce/polarization/py.typed similarity index 100% rename from packages/esspolarization/src/ess/polarization/py.typed rename to packages/essreduce/src/ess/reduce/polarization/py.typed diff --git a/packages/esspolarization/src/ess/polarization/supermirror.py b/packages/essreduce/src/ess/reduce/polarization/supermirror.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/supermirror.py rename to packages/essreduce/src/ess/reduce/polarization/supermirror.py diff --git a/packages/esspolarization/src/ess/polarization/types.py b/packages/essreduce/src/ess/reduce/polarization/types.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/types.py rename to packages/essreduce/src/ess/reduce/polarization/types.py diff --git a/packages/esspolarization/src/ess/polarization/zoom.py b/packages/essreduce/src/ess/reduce/polarization/zoom.py similarity index 100% rename from packages/esspolarization/src/ess/polarization/zoom.py rename to packages/essreduce/src/ess/reduce/polarization/zoom.py diff --git a/packages/esspolarization/tests/correction_test.py b/packages/essreduce/tests/polarization/correction_test.py similarity index 98% rename from packages/esspolarization/tests/correction_test.py rename to packages/essreduce/tests/polarization/correction_test.py index b1a6ad344..5c36f67cf 100644 --- a/packages/esspolarization/tests/correction_test.py +++ b/packages/essreduce/tests/polarization/correction_test.py @@ -1,21 +1,23 @@ # SPDX-License-Identifier: BSD-3-Clause # Copyright (c) 2024 Scipp contributors (https://github.com/scipp) -import ess.polarization as pol import numpy as np import pytest import sciline import scipp as sc -from ess.polarization import ( +from scipp.testing import assert_allclose + +import ess.reduce.polarization as pol +from ess.reduce.polarization import ( CorrectionWorkflow, He3CellWorkflow, PolarizationAnalysisWorkflow, SupermirrorWorkflow, ) -from ess.polarization.correction import ( +from ess.reduce.polarization.correction import ( FlipperEfficiency, compute_polarizing_element_correction, ) -from ess.polarization.types import ( +from ess.reduce.polarization.types import ( Analyzer, Down, HalfPolarizedCorrectedData, @@ -26,7 +28,6 @@ TransmissionFunction, Up, ) -from scipp.testing import assert_allclose class SimpleTransmissionFunction: diff --git a/packages/esspolarization/tests/direct_beam_test.py b/packages/essreduce/tests/polarization/direct_beam_test.py similarity index 99% rename from packages/esspolarization/tests/direct_beam_test.py rename to packages/essreduce/tests/polarization/direct_beam_test.py index d3f922f10..b3f95ed92 100644 --- a/packages/esspolarization/tests/direct_beam_test.py +++ b/packages/essreduce/tests/polarization/direct_beam_test.py @@ -3,10 +3,11 @@ import numpy as np import pytest import scipp as sc -from ess import polarization as pol -from ess.polarization import base from scipp.testing import assert_allclose, assert_identical +from ess.reduce import polarization as pol +from ess.reduce.polarization import base + # Setup logs for four sections of length 250: # - 10 s direct beam no cell (only in beginning) # - For each section: diff --git a/packages/esspolarization/tests/he3/opacity_test.py b/packages/essreduce/tests/polarization/he3/opacity_test.py similarity index 98% rename from packages/esspolarization/tests/he3/opacity_test.py rename to packages/essreduce/tests/polarization/he3/opacity_test.py index 59c839c7a..dd8fa09da 100644 --- a/packages/esspolarization/tests/he3/opacity_test.py +++ b/packages/essreduce/tests/polarization/he3/opacity_test.py @@ -2,9 +2,10 @@ # Copyright (c) 2024 Scipp contributors (https://github.com/scipp) import pytest import scipp as sc -from ess.polarization import he3 from scipp.testing import assert_identical +from ess.reduce.polarization import he3 + def test_opacity_from_cell_params() -> None: # In practice, the cell pressure, length, and temperature are constant, this is diff --git a/packages/esspolarization/tests/he3/polarization_test.py b/packages/essreduce/tests/polarization/he3/polarization_test.py similarity index 99% rename from packages/esspolarization/tests/he3/polarization_test.py rename to packages/essreduce/tests/polarization/he3/polarization_test.py index dbe964d6e..ef1eecd57 100644 --- a/packages/esspolarization/tests/he3/polarization_test.py +++ b/packages/essreduce/tests/polarization/he3/polarization_test.py @@ -3,7 +3,8 @@ import numpy as np import pytest import scipp as sc -from ess.polarization import he3 + +from ess.reduce.polarization import he3 def test_incoming_unpolarized_reproduces_input_params_within_errors() -> None: diff --git a/packages/esspolarization/tests/supermirror_test.py b/packages/essreduce/tests/polarization/supermirror_test.py similarity index 97% rename from packages/esspolarization/tests/supermirror_test.py rename to packages/essreduce/tests/polarization/supermirror_test.py index 5d53e0bf2..004238873 100644 --- a/packages/esspolarization/tests/supermirror_test.py +++ b/packages/essreduce/tests/polarization/supermirror_test.py @@ -2,12 +2,13 @@ # Copyright (c) 2024 Scipp contributors (https://github.com/scipp) import io -import ess.polarization as pol import pytest import scipp as sc -from ess.polarization.data import example_polarization_efficiency_table from scipp.testing import assert_allclose +import ess.reduce.polarization as pol +from ess.reduce.polarization.data import example_polarization_efficiency_table + def test_SecondDegreePolynomialEfficiency_raises_if_units_incompatible(): wav = sc.scalar(1.0, unit='m') diff --git a/pixi.lock b/pixi.lock index caea026e5..c25ae5ad6 100644 --- a/pixi.lock +++ b/pixi.lock @@ -1091,6 +1091,7 @@ environments: - 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